The Peptide CommonsEst. May 2024
Independent. We sell nothing and are affiliated with no manufacturer or pharmacy. Every moderation action is logged in public
Evidence · Trials · continued

Run-in periods and the population they select posts 91–120

This is a continuation of a long topic, addressed by post number rather than by page. Start at post 1.

IR
isotonic_reviewTL1Member31 Mar 2026#91
v.nascimento, post #32: Picking up post #29: that is the part I would want checked first. The claim about run-in periods upthread is stronger than its source supports. I have read the source. The source says "associated with" and the post says "causes". Go to post

A treatment-policy estimand asks what happens to people assigned to a strategy, including those who abandon it. A hypothetical estimand asks what would have happened had everyone continued. Both are legitimate and they give different numbers.

Written from notes rather than memory, which is why the numbers are specific.

9 likes in reply to #32 4mo
KK
k.kimaniTL22 Apr 2026#92
h.karlsen, post #12: Two things can be true about run-in periods at once: the mechanism is plausible and the evidence for the size of the effect is thin. Most of the argument here is people defending the first against attacks on the second. Go to post

Building on post #91 rather than restating it.

Effect sizes in a trial population reflect adherence achieved under trial conditions, which is generally better than adherence outside them.

I have deliberately not rounded that, because the rounding is where the argument starts.

2 likes in reply to #12 4mo
ZL
z.laurentTL23 Apr 2026#93

That is the distinction I keep failing to hold on to. Written down now.

0 likes 4mo
KC
k.chukwuTL25 Apr 2026#94

Practical answer on run-in periods, since the theoretical one is upthread: do the simplest check first, write down the result, and only then decide whether the complicated explanation is needed. It usually is not.

21 likes 4mo
EL
e.lehtinenTL27 Apr 2026#95

Post #91 and I disagree about the size of the effect, not about the direction.

Genuine question rather than a rhetorical one: has anyone here actually observed run-in periods, as opposed to read about it? The thread is long and I cannot tell.

5 likes 4mo
HE
h.eriksenTL29 Apr 2026#96
m.achebe, post #22: Risk of bias: structured appraisal of internal validity. Key things to assess: randomisation method (was it truly random or could someone predict the next assignment), concealment (could randomisation be subverted), blinding (who was blinded and why or why not), completeness of outcome reporting. Go to post

Taking post #95 at face value and following it one step further.

Absolute and relative effects answer different questions. Write down the event rate in each arm and the difference between them; everything quotable is derived from those two numbers.

On reflection I would soften that slightly.

0 likes in reply to #22 4mo
TP
t.pereiraTL210 Apr 2026#97

A treatment-policy estimand asks what happens to people assigned to a strategy, including those who abandon it. A hypothetical estimand asks what would have happened had everyone continued. Both are legitimate and they give different numbers.

29 likes 4mo
BA
b.aaltoTL212 Apr 2026#98

Two people in this thread mean different things by run-in periods and are disagreeing about the definition while believing they are disagreeing about the facts. Worth pausing to define it.

14 likes 4mo
TW
t.waldenstrmTL2Member14 Apr 2026 · edited#99

Worth separating two things that post #95 runs together.

If someone has run run-in periods properly I would rather read that than my own reconstruction of it. Posting mine only because the thread has gone quiet.

2 likes 3mo
EK
ew.kuuselaTL215 Apr 2026#100
n.rahimi, post #33: Run-in periods: I would want to see the raw numbers rather than the summary before agreeing. Summaries lose exactly the information that would settle this. Go to post

Bookmarking this. I will come back when I have something worth adding.

0 likes in reply to #33 3mo
NC
n.cardosoTL217 Apr 2026#101
dr_okonkwo, post #1: On the subject in the title: Run-in periods and the population they select Working notes rather than a conclusion. An honest uncertainty about run-in periods rather than a disguised assertion. I do not know the answer and I have not been able to find one. What I have is the shape of the question, which may be worth more than my guess at… Go to post

Entry criteria, run-in periods and the self-selection of people willing to enter a multi-year trial all narrow the population. That is how internal validity is bought and it constrains generalisation.

The uncertainty is in the assumption, not in the calculation.

18 likes in reply to #1 3mo
P
preregisteredTL3Research methods19 Apr 2026#102

Summarising the run-in periods thread so far, since it is long and the answer is buried: the first reply has the method, the fourth has the correction to it, and the rest is people agreeing at length.

7 likes 3mo
AP
a.pereiraTL221 Apr 2026 · edited#103

The most useful reply I ever got about run-in periods was a request to state my units. It sounds like pedantry and it has saved me twice.

0 likes 3mo
PE
ppm_errorTL3Analytical chemist22 Apr 2026#104

Post #103 is right about the mechanism and I think understates the practical bit.

Risk of bias: structured appraisal of internal validity. Key things to assess: randomisation method (was it truly random or could someone predict the next assignment), concealment (could randomisation be subverted), blinding (who was blinded and why or why not), completeness of outcome reporting.

0 likes 3mo
YI
y.ibarraTL224 Apr 2026#105
k.chukwu, post #94: Practical answer on run-in periods, since the theoretical one is upthread: do the simplest check first, write down the result, and only then decide whether the complicated explanation is needed. It usually is not. Go to post

That is a cleaner way of putting what I was circling around.

25 likes in reply to #94 3mo
PN
plateau_notesTL2Regular26 Apr 2026#106
diluent_watch, post #72: Building on post #69 rather than restating it. The number people quote for run-in periods is a central estimate presented without its interval, and the interval is wide enough that the estimate is nearly uninformative on its own. Go to post

Nothing in a trial report is medical advice about an individual, and the gap between a population estimate and a person is exactly where clinical judgement lives.

Reading it back, the second half matters more than the first.

12 likes in reply to #72 3mo
NV
n.vukovicTL227 Apr 2026 · edited#107

I had written a reply contradicting post #103 and deleted it. Here is what survived.

One more thing on run-in periods that took me far too long to see: the two figures people quote are not measuring the same quantity. Once you notice that, the apparent contradiction disappears.

1 like 3mo
OL
o.lindgrenTL2Regular29 Apr 2026#108

Confirming post #107 from a second method, which matters more than confirming it from a second person.

Absolute numbers, not just relative: a 30% relative reduction tells you the ratio but not the practical magnitude. The event rate in each arm and the difference between them tells you how many people benefit.

0 likes 3mo
AN
a.nascimentoTL21 May 2026#109
a.kravchenko, post #86: Reading this run-in periods thread as someone who came in with a fixed view: the third and seventh replies moved me and the confident ones did not. Go to post

I read the earlier replies on run-in periods twice before writing this, because I had assumed the opposite and wanted to be sure I was disagreeing with what was said rather than what I expected.

0 likes in reply to #86 3mo
KB
k.brandl_deTL3Translator · DE2 May 2026#110

Taking post #107 at face value and following it one step further.

The honest answer on run-in periods is that it depends, and the useful part is the list of what it depends on. Four items, in rough order of how much they matter.

Most people get the first two right and then argue about the fourth.

17 likes 3mo
MD
m.duarteTL24 May 2026#111

Risk of bias: structured appraisal of internal validity. Key things to assess: randomisation method (was it truly random or could someone predict the next assignment), concealment (could randomisation be subverted), blinding (who was blinded and why or why not), completeness of outcome reporting.

A single observation, in a thread that deserves better than single observations.

27 likes 3mo
OV
o.vogelTL26 May 2026#112

Generalisability: the enrolled population was selected in ways that matter. Entry criteria, run-in periods, and the simple fact that people who agree to a multi-year trial differ from people who do not, all narrow the population. That is how internal validity is bought, at the cost of external validity.

I would put the burden of proof on the interesting explanation, not the dull one.

0 likes 3mo
RV
r.villalobosTL27 May 2026#113

Building on post #110 rather than restating it.

I keep a log for run-in periods specifically because my memory of it turned out to be systematically wrong in one direction. Six weeks of notes cost nothing and settled it.

4 likes 3mo
RD
r.danquahTL29 May 2026#114
h.bakker, post #48: Nothing to add, except that this is the answer I would give if asked. Go to post

Clear enough that I do not think I have a follow-up, which is unusual.

13 likes in reply to #48 3mo
KF
k.fonsecaTL211 May 2026#115
a.kravchenko, post #86: Reading this run-in periods thread as someone who came in with a fixed view: the third and seventh replies moved me and the confident ones did not. Go to post

The confident answers on run-in periods and the well-sourced answers are not the same answers, which is the most useful thing I have learned reading this category.

20 likes in reply to #86 3mo
KV
k.vanheckeTL212 May 2026#116

A treatment-policy estimand asks what happens to people assigned to a strategy, including those who abandon it. A hypothetical estimand asks what would have happened had everyone continued. Both are legitimate and they give different numbers.

That is the honest state of it as of this week.

0 likes 3mo
KP
k.perrinTL214 May 2026#117

Before the thread moves on from run-in periods — what is the sample size behind the claim? I am not being difficult; I have seen the same figure quoted from an n of four and from an n of four hundred.

2 likes 2mo
BN
bench_notesTL4 Moderator16 May 2026#118
c.wijnberg, post #62: On post #58 — agreed on the reasoning, with one qualification. Generalisability: the enrolled population was selected in ways that matter. Entry criteria, run-in periods, and the simple fact that people who agree to a multi-year trial differ from people who do not, all narrow the population. That is how internal validity is bought, at… Go to post

Where I part company with post #116, and it is a narrow parting.

Adding the boring version of run-in periods, because the interesting version keeps getting posted and the boring one is usually right.

Check the ordinary explanations, in order, and stop when one of them accounts for what you are seeing. Most of the time the second one does.

8 likes in reply to #62 2mo
AV
a.vukovicTL217 May 2026#119
preregistered, post #102: Summarising the run-in periods thread so far, since it is long and the answer is buried: the first reply has the method, the fourth has the correction to it, and the rest is people agreeing at length. Go to post

Picking up post #118: that is the part I would want checked first.

Absolute and relative effects answer different questions. Write down the event rate in each arm and the difference between them; everything quotable is derived from those two numbers.

0 likes in reply to #102 2mo
RA
r.aldana_pharmdTL4Pharmacist19 May 2026#120

I would put moderate confidence on the mainstream reading of run-in periods and no more. That is not scepticism for its own sake; it is where the sourcing actually stops.

2 likes 2mo