The Peptide CommonsEst. May 2024
Independent. We sell nothing and are affiliated with no manufacturer or pharmacy. Every moderation action is logged in public
Research Methods · Statistics · continued

Correlation in a self-tracked dataset: what it can support posts 31–60

This is a continuation of a long topic, addressed by post number rather than by page. Start at post 1.

FR
f.rasmussenTL221 Aug 2024#31

Post #30 is the version of this I will quote in future. One addition.

Correlation: I would want to see the raw numbers rather than the summary before agreeing. Summaries lose exactly the information that would settle this.

6 likes 23mo
PR
policy_readerTL2Regular21 Aug 2024#32

Where I part company with post #28, and it is a narrow parting.

The reason correlation is hard to answer is that the obvious measurement and the relevant quantity are not the same thing, and substituting one for the other is silent.

16 likes 23mo
EA
e.adeyemiTL221 Aug 2024#33

Confounding: a third variable explains an apparent association. In randomised data, randomisation balances confounders. In observational data, confounders can be adjusted for but unknown ones cannot.

I would hold that lightly until someone with a larger sample weighs in.

0 likes 23mo
GT
g.tanakaTL3Regular21 Aug 2024#34
n.kuusela, post #8: Effect sizes: the magnitude of a difference, not just whether it is statistically significant. A difference that is significant (p Go to post

Practical experience of correlation, offered as one case with the conditions stated, not as a general finding. Conditions first, because they are what make it interpretable.

1 like in reply to #8 23mo
NS
no.silvaTL221 Aug 2024 · edited#35
sharps_bin, post #16: Worth separating two things that post #15 runs together. What I can speak to on correlation is narrow, so I will keep it narrow rather than generalising from it. Beyond that boundary I do not know. Go to post

A p-value is the probability of data at least this extreme given the null hypothesis. It is not the probability the hypothesis is false, and almost every plain-language gloss gets that backwards.

Happy to be corrected if someone holds better data than mine.

10 likes in reply to #16 23mo
NG
np_gilmoreTL3Nurse practitioner21 Aug 2024#36

I had written a reply contradicting post #32 and deleted it. Here is what survived.

The claim about correlation upthread is stronger than its source supports. I have read the source. The source says "associated with" and the post says "causes".

22 likes 23mo
MV
m.vukovicTL221 Aug 2024#37

Sensible. I would want the same detail before I acted on it either.

0 likes 23mo
MD
m.dalgaardTL3Regular21 Aug 2024#38

An observation about correlation that I cannot explain and am posting anyway, on the principle that unexplained observations are more useful public than private.

3 likes 23mo
MO
m.onwukaTL221 Aug 2024#39
g.pemberton_uk, post #30: Number needed to treat: how many people need to be treated to prevent one bad outcome or achieve one good outcome. More intuitive than relative risk reduction. Reading it again, the caveat matters more than the finding. Go to post

Percentages of small denominators should be reported with the denominator. Two out of three is not sixty-seven per cent in any useful sense.

For what it is worth, the same held on the two occasions I checked.

32 likes in reply to #30 23mo
OB
owen.bradyTL4 Moderator21 Aug 2024#40

A distribution shown is worth ten summary statistics. Where a paper shows individual data points, read those first.

Adding it in case it saves somebody the afternoon it cost me.

0 likes 23mo
KA
k.agyemanTL221 Aug 2024 · edited#41
f.yildiz, post #27: Bayesian and frequentist analyses answer different questions and both are legitimate. What matters is that the reader knows which is on offer. I have left out the parts I could not verify. Go to post

An update on my earlier correlation post: the pattern held for another six weeks and then stopped, which I did not predict and cannot explain.

0 likes in reply to #27 23mo
NT
n.torrenceTL3Regular21 Aug 2024#42
j.restrepo, post #19: Counterpoint on correlation, offered without confidence: the same observation is consistent with a much duller explanation, and nobody has ruled the dull one out. Go to post

Post #41 answers the question as asked. The question underneath it is different.

Correlation sits at the boundary between what this community can usefully discuss and what it cannot, and I think it falls on the discussable side, narrowly.

18 likes in reply to #19 23mo
BR
b.restrepoTL222 Aug 2024#43

Worth separating two things that post #41 runs together.

Survivorship in a self-reporting population biases every aggregate produced from it, and the bias is in the flattering direction.

I would be interested in a counterexample if anyone has one.

7 likes 23mo
BM
buffer_marginTL3Regular22 Aug 2024#44

Bayesian and frequentist analyses answer different questions and both are legitimate. What matters is that the reader knows which is on offer.

Anyone who has looked at this more carefully, please correct the record.

1 like 23mo
JH
j.hartmannTL222 Aug 2024#45

Correlation would be much easier to settle if anyone reported the denominator. Almost nobody reports the denominator.

26 likes 23mo
P
PSkarbekTL3Regular22 Aug 2024#46
sharps_bin, post #16: Worth separating two things that post #15 runs together. What I can speak to on correlation is narrow, so I will keep it narrow rather than generalising from it. Beyond that boundary I do not know. Go to post

Acknowledging rather than arguing. The reasoning holds as far as I can follow it.

12 likes in reply to #16 23mo
IC
i.coelhoTL222 Aug 2024#47

Post #45 and I disagree about the size of the effect, not about the direction.

I think the correlation question is answerable and has not been answered, which is a more optimistic position than most of this thread.

4 likes 23mo
DP
d.petrescuTL222 Aug 2024#48

Taking post #45 at face value and following it one step further.

Where an analysis was changed after seeing the data, the honest thing is to report both and say which was pre-specified.

I am not the right person to answer the follow-up to this.

0 likes 23mo
KO
k.okaforTL222 Aug 2024#49
n.hartmann, post #23: Baseline imbalance in a randomised trial is expected by chance and adjusting for it post hoc is a choice that should have been pre-specified. Scoping that to what I have actually seen rather than what I have read. Go to post

P-values and significance: p<0.05 means the data would be surprising if the null hypothesis were true, not that the null hypothesis is false. A non-significant p-value does not mean "no effect".

Same conclusion as the reply above, reached differently, which is mildly reassuring.

19 likes in reply to #23 23mo
B
BBramleyTL3Regular22 Aug 2024#50

I would keep correlation and the decision it usually gets used for separate in this thread. They are related and they are not the same question, and merging them is why the last one went badly.

8 likes 23mo
RS
r.sobczakTL222 Aug 2024#51

The confident answers on correlation and the well-sourced answers are not the same answers, which is the most useful thing I have learned reading this category.

0 likes 23mo
EA
e.almeidaTL222 Aug 2024#52
PT
p.trevinoTL222 Aug 2024#53

Picking up post #51: that is the part I would want checked first.

Percentages of small denominators should be reported with the denominator. Two out of three is not sixty-seven per cent in any useful sense.

That matches what I was told, which is not the same as knowing it.

8 likes 23mo
R
RodriguesTL3Regular22 Aug 2024#54
vial_slope, post #22: Post #19 is the version of this I will quote in future. One addition. Practical answer on correlation, since the theoretical one is upthread: do the simplest check first, write down the result, and only then decide whether the complicated explanation is needed. It usually is not. Go to post

On post #50 — agreed on the reasoning, with one qualification.

A distribution shown is worth ten summary statistics. Where a paper shows individual data points, read those first.

Not the whole picture, but the part of it I can speak to.

19 likes in reply to #22 23mo
HB
h.brandtTL222 Aug 2024#55
owen.brady, post #40: A distribution shown is worth ten summary statistics. Where a paper shows individual data points, read those first. Adding it in case it saves somebody the afternoon it cost me. Go to post

I keep a log for correlation specifically because my memory of it turned out to be systematically wrong in one direction. Six weeks of notes cost nothing and settled it.

0 likes in reply to #40 23mo
IS
isotonic_sheetTL3Regular22 Aug 2024#56

Coming back to post #54, because the follow-up matters more than the original answer.

Two things can be true about correlation at once: the mechanism is plausible and the evidence for the size of the effect is thin. Most of the argument here is people defending the first against attacks on the second.

0 likes 23mo
KP
k.pereiraTL222 Aug 2024 · edited#57

This follows post #56 rather than contradicting it.

Confounding: a third variable explains an apparent association. In randomised data, randomisation balances confounders. In observational data, confounders can be adjusted for but unknown ones cannot.

Written in the hope of being told what I have missed.

4 likes 23mo
RV
r.venkatesanTL3Wiki editor22 Aug 2024#58
g.pemberton_uk, post #30: Number needed to treat: how many people need to be treated to prevent one bad outcome or achieve one good outcome. More intuitive than relative risk reduction. Reading it again, the caveat matters more than the finding. Go to post

For anyone finding this later: the short answer on correlation is that it depends on one thing, and the rest of the thread is people identifying which thing.

13 likes in reply to #30 23mo
AW
ai.wikstromTL222 Aug 2024#59
TS
t.steenkampTL2Member22 Aug 2024#60

I read post #58 twice before replying, because I had assumed the opposite.

My experience of correlation contradicts the reply above. I am posting it as a data point rather than as a refutation, because one person's experience is exactly that.

0 likes 23mo